📦 orthofinder-linux-intel-3.1.1.tar.gz

New

  • Added a test module to improve robustness of future changes.

Improvements

  • Upgraded the tree-handling backend from ete3 to ete4.
  • Updated the README to better highlight and clarify the changes introduced in v3.1.0.

Bug Fixes

  • Fixed an issue affecting the trimming of multiple sequence alignments.
  • Resolved a newline character handling bug.
  • Applied additional minor bug fixes and internal code clean-ups.