📦 orthofinder-linux-intel-3.1.5.tar.gz

Bug Fixes

  • Fixed packaging and installation issues for OrthoFinder utility scripts in pip/conda environments.
  • Improved robustness of utility scripts, including recursive directory handling, archive processing, and compatibility with ETE4 ultrametric tree generation.
  • Added several new command-line utilities and enhanced existing tools for transcript processing, orthogroup gene counts, HOG FASTA generation, and tree ID conversion.